BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D02LP1|AL429887
(888 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1744 0.0
>3x_Contig1783
Length = 22123
Score = 1744 bits (879), Expect = 0.0
Identities = 887/889 (99%), Gaps = 1/889 (0%)
Strand = Plus / Minus
Query: 1 atcagcgaaaaattcagcaatggcggcagaaccaatgtaaatagtgttcttgtagttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11280 atcagcgaaaaattcagcaatggcggcagaaccaatgtaaatagtgttcttgtagttaac 11221
Query: 61 agcgttgtcgtaacccatgttgtcaatggccaactttttgaacaattcgtaaccaccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11220 agcgttgtcgtaacccatgttgtcaatggccaactttttgaacaattcgtaaccaccaaa 11161
Query: 121 cttgaaggaaccttgcaaagagtaacccaacaaagttggaccgaaaccggtcaaaagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11160 cttgaaggaaccttgcaaagagtaacccaacaaagttggaccgaaaccggtcaaaagagc 11101
Query: 181 accagcaccttcactggaaatgatttgtttgaaagaggaaaccatacccttgttgtagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11100 accagcaccttcactggaaatgatttgtttgaaagaggaaaccatacccttgttgtagac 11041
Query: 241 ggttggttccaattgaattctagtcttgacgacatcaattgggaccatggaggagtgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11040 ggttggttccaattgaattctagtcttgacgacatcaattgggaccatggaggagtgggt 10981
Query: 301 aataccacaaccaatggcaccagccaaagcgaacttggcgtaatcagaaacagtatattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10980 aataccacaaccaatggcaccagccaaagcgaacttggcgtaatcagaaacagtatattc 10921
Query: 361 aggaacaggagaagccatccttgctagttttttagaacgttgtatggggaggttgctaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10920 aggaacaggagaagccatccttgctagttttttagaacgttgtatggggaggttgctaga 10861
Query: 421 cgaaaatctgttaaaaacgatgttaagattactaaaactaaattaaactaaaaagtgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10860 cgaaaatctgttaaaaacgatgttaagattactaaaactaaattaaactaaaaagtgtct 10801
Query: 481 ggtaaactagatggttatttaatttctaatgtatggtttagtatatatataaagagagcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10800 ggtaaactagatggttatttaatttctaatgtatggtttagtatatatataaagagagcg 10741
Query: 541 atatgggaatttaaaagaaaaatttattagaaattacgggagcgcattgaggttgttttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10740 atatgggaatttaaaagaaaaatttattagaaattacgggagcgcattgaggttgttttt 10681
Query: 601 ttttattaagttacgaaaatattgcagcaaaaaaaagatttaagatatcgtagctgcgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10680 ttttattaagttacgaaaatattgcagcaaaaaaaagatttaagatatcgtagctgcgtt 10621
Query: 661 cgaagaattttcgaagcgtttgaaaatacgctattgcttttttctcgcaggagcaagttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10620 cgaagaattttcgaagcgtttgaaaatacgctattgcttttttctcgcaggagcaagttt 10561
Query: 721 atcccgtggtttttcctcttctgtatatatcgcgcgc-acgcacggtgcgtgsggtaatt 779
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 10560 atcccgtggtttttcctcttctgtatatatcgcgcgcaacgcacggtgcgtgcggtaatt 10501
Query: 780 gtccccacgcgcacgttaaaaaaataagtgtcgtttttttgtagttgtgaaaaagaaaac 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10500 gtccccacgcgcacgttaaaaaaataagtgtcgtttttttgtagttgtgaaaaagaaaac 10441
Query: 840 tttttttttaggttttgtctttctttttgcgtagaaaacaatgaaatct 888
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10440 tttttttttaggttttgtctttctttttgcgtagaaaacaatgaaatct 10392
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9664
Number of Sequences: 1807
Number of extensions: 9664
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)